The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Identifieur interne : 003D04 ( Main/Exploration ); précédent : 003D03; suivant : 003D05The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
Auteurs : G A Tuskan [États-Unis] ; S. Difazio ; S. Jansson ; J. Bohlmann ; I. Grigoriev ; U. Hellsten ; N. Putnam ; S. Ralph ; S. Rombauts ; A. Salamov ; J. Schein ; L. Sterck ; A. Aerts ; R R Bhalerao ; R P Bhalerao ; D. Blaudez ; W. Boerjan ; A. Brun ; A. Brunner ; V. Busov ; M. Campbell ; J. Carlson ; M. Chalot ; J. Chapman ; G-L Chen ; D. Cooper ; P M Coutinho ; J. Couturier ; S. Covert ; Q. Cronk ; R. Cunningham ; J. Davis ; S. Degroeve ; A. Déjardin ; C. Depamphilis ; J. Detter ; B. Dirks ; I. Dubchak ; S. Duplessis ; J. Ehlting ; B. Ellis ; K. Gendler ; D. Goodstein ; M. Gribskov ; J. Grimwood ; A. Groover ; L. Gunter ; B. Hamberger ; B. Heinze ; Y. Helariutta ; B. Henrissat ; D. Holligan ; R. Holt ; W. Huang ; N. Islam-Faridi ; S. Jones ; M. Jones-Rhoades ; R. Jorgensen ; C. Joshi ; J. Kangasj Rvi ; J. Karlsson ; C. Kelleher ; R. Kirkpatrick ; M. Kirst ; A. Kohler ; U. Kalluri ; F. Larimer ; J. Leebens-Mack ; J-C Leplé ; P. Locascio ; Y. Lou ; S. Lucas ; F. Martin ; B. Montanini ; C. Napoli ; D R Nelson ; C. Nelson ; K. Nieminen ; O. Nilsson ; V. Pereda ; G. Peter ; R. Philippe ; G. Pilate ; A. Poliakov ; J. Razumovskaya ; P. Richardson ; C. Rinaldi ; K. Ritland ; P. Rouzé ; D. Ryaboy ; J. Schmutz ; J. Schrader ; B. Segerman ; H. Shin ; A. Siddiqui ; F. Sterky ; A. Terry ; C-J Tsai ; E. Uberbacher ; P. Unneberg ; J. Vahala ; K. Wall ; S. Wessler ; G. Yang ; T. Yin ; C. Douglas ; M. Marra ; G. Sandberg ; Y. Van De Peer ; D. RokhsarSource :
- Science (New York, N.Y.) [ 1095-9203 ] ; 2006.
Descripteurs français
- KwdFr :
- ARN des plantes (analyse), ARN non traduit (analyse), Analyse de séquence d'ADN (MeSH), Arabidopsis (génétique), Biologie informatique (MeSH), Cartographie chromosomique (MeSH), Duplication de gène (MeSH), Expression des gènes (MeSH), Gènes de plante (MeSH), Génome végétal (MeSH), Phylogenèse (MeSH), Polymorphisme de nucléotide simple (MeSH), Populus (croissance et développement), Populus (génétique), Populus (métabolisme), Protéines végétales (composition chimique), Protéines végétales (génétique), Structure tertiaire des protéines (MeSH), Séquençage par oligonucléotides en batterie (MeSH), Étiquettes de séquences exprimées (MeSH), Évolution moléculaire (MeSH).
- MESH :
- analyse : ARN des plantes, ARN non traduit.
- composition chimique : Protéines végétales.
- croissance et développement : Populus.
- génétique : Arabidopsis, Populus, Protéines végétales.
- métabolisme : Populus.
- Analyse de séquence d'ADN, Biologie informatique, Cartographie chromosomique, Duplication de gène, Expression des gènes, Gènes de plante, Génome végétal, Phylogenèse, Polymorphisme de nucléotide simple, Structure tertiaire des protéines, Séquençage par oligonucléotides en batterie, Étiquettes de séquences exprimées, Évolution moléculaire.
English descriptors
- KwdEn :
- Arabidopsis (genetics), Chromosome Mapping (MeSH), Computational Biology (MeSH), Evolution, Molecular (MeSH), Expressed Sequence Tags (MeSH), Gene Duplication (MeSH), Gene Expression (MeSH), Genes, Plant (MeSH), Genome, Plant (MeSH), Oligonucleotide Array Sequence Analysis (MeSH), Phylogeny (MeSH), Plant Proteins (chemistry), Plant Proteins (genetics), Polymorphism, Single Nucleotide (MeSH), Populus (genetics), Populus (growth & development), Populus (metabolism), Protein Structure, Tertiary (MeSH), RNA, Plant (analysis), RNA, Untranslated (analysis), Sequence Analysis, DNA (MeSH).
- MESH :
- chemical , analysis : RNA, Plant, RNA, Untranslated.
- chemical , chemistry : Plant Proteins.
- genetics : Arabidopsis, Plant Proteins, Populus.
- growth & development : Populus.
- metabolism : Populus.
- Chromosome Mapping, Computational Biology, Evolution, Molecular, Expressed Sequence Tags, Gene Duplication, Gene Expression, Genes, Plant, Genome, Plant, Oligonucleotide Array Sequence Analysis, Phylogeny, Polymorphism, Single Nucleotide, Protein Structure, Tertiary, Sequence Analysis, DNA.
Abstract
We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport.
DOI: 10.1126/science.1128691
PubMed: 16973872
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Karlsson</name></author><author><name sortKey="Kelleher, C" sort="Kelleher, C" uniqKey="Kelleher C" first="C" last="Kelleher">C. Kelleher</name></author><author><name sortKey="Kirkpatrick, R" sort="Kirkpatrick, R" uniqKey="Kirkpatrick R" first="R" last="Kirkpatrick">R. Kirkpatrick</name></author><author><name sortKey="Kirst, M" sort="Kirst, M" uniqKey="Kirst M" first="M" last="Kirst">M. Kirst</name></author><author><name sortKey="Kohler, A" sort="Kohler, A" uniqKey="Kohler A" first="A" last="Kohler">A. Kohler</name></author><author><name sortKey="Kalluri, U" sort="Kalluri, U" uniqKey="Kalluri U" first="U" last="Kalluri">U. Kalluri</name></author><author><name sortKey="Larimer, F" sort="Larimer, F" uniqKey="Larimer F" first="F" last="Larimer">F. Larimer</name></author><author><name sortKey="Leebens Mack, J" sort="Leebens Mack, J" uniqKey="Leebens Mack J" first="J" last="Leebens-Mack">J. Leebens-Mack</name></author><author><name sortKey="Leple, J C" sort="Leple, J C" uniqKey="Leple J" first="J-C" last="Leplé">J-C Leplé</name></author><author><name sortKey="Locascio, P" sort="Locascio, P" uniqKey="Locascio P" first="P" last="Locascio">P. Locascio</name></author><author><name sortKey="Lou, Y" sort="Lou, Y" uniqKey="Lou Y" first="Y" last="Lou">Y. Lou</name></author><author><name sortKey="Lucas, S" sort="Lucas, S" uniqKey="Lucas S" first="S" last="Lucas">S. Lucas</name></author><author><name sortKey="Martin, F" sort="Martin, F" uniqKey="Martin F" first="F" last="Martin">F. Martin</name></author><author><name sortKey="Montanini, B" sort="Montanini, B" uniqKey="Montanini B" first="B" last="Montanini">B. Montanini</name></author><author><name sortKey="Napoli, C" sort="Napoli, C" uniqKey="Napoli C" first="C" last="Napoli">C. Napoli</name></author><author><name sortKey="Nelson, D R" sort="Nelson, D R" uniqKey="Nelson D" first="D R" last="Nelson">D R Nelson</name></author><author><name sortKey="Nelson, C" sort="Nelson, C" uniqKey="Nelson C" first="C" last="Nelson">C. Nelson</name></author><author><name sortKey="Nieminen, K" sort="Nieminen, K" uniqKey="Nieminen K" first="K" last="Nieminen">K. Nieminen</name></author><author><name sortKey="Nilsson, O" sort="Nilsson, O" uniqKey="Nilsson O" first="O" last="Nilsson">O. Nilsson</name></author><author><name sortKey="Pereda, V" sort="Pereda, V" uniqKey="Pereda V" first="V" last="Pereda">V. Pereda</name></author><author><name sortKey="Peter, G" sort="Peter, G" uniqKey="Peter G" first="G" last="Peter">G. Peter</name></author><author><name sortKey="Philippe, R" sort="Philippe, R" uniqKey="Philippe R" first="R" last="Philippe">R. Philippe</name></author><author><name sortKey="Pilate, G" sort="Pilate, G" uniqKey="Pilate G" first="G" last="Pilate">G. Pilate</name></author><author><name sortKey="Poliakov, A" sort="Poliakov, A" uniqKey="Poliakov A" first="A" last="Poliakov">A. Poliakov</name></author><author><name sortKey="Razumovskaya, J" sort="Razumovskaya, J" uniqKey="Razumovskaya J" first="J" last="Razumovskaya">J. Razumovskaya</name></author><author><name sortKey="Richardson, P" sort="Richardson, P" uniqKey="Richardson P" first="P" last="Richardson">P. Richardson</name></author><author><name sortKey="Rinaldi, C" sort="Rinaldi, C" uniqKey="Rinaldi C" first="C" last="Rinaldi">C. Rinaldi</name></author><author><name sortKey="Ritland, K" sort="Ritland, K" uniqKey="Ritland K" first="K" last="Ritland">K. Ritland</name></author><author><name sortKey="Rouze, P" sort="Rouze, P" uniqKey="Rouze P" first="P" last="Rouzé">P. Rouzé</name></author><author><name sortKey="Ryaboy, D" sort="Ryaboy, D" uniqKey="Ryaboy D" first="D" last="Ryaboy">D. Ryaboy</name></author><author><name sortKey="Schmutz, J" sort="Schmutz, J" uniqKey="Schmutz J" first="J" last="Schmutz">J. Schmutz</name></author><author><name sortKey="Schrader, J" sort="Schrader, J" uniqKey="Schrader J" first="J" last="Schrader">J. Schrader</name></author><author><name sortKey="Segerman, B" sort="Segerman, B" uniqKey="Segerman B" first="B" last="Segerman">B. Segerman</name></author><author><name sortKey="Shin, H" sort="Shin, H" uniqKey="Shin H" first="H" last="Shin">H. Shin</name></author><author><name sortKey="Siddiqui, A" sort="Siddiqui, A" uniqKey="Siddiqui A" first="A" last="Siddiqui">A. Siddiqui</name></author><author><name sortKey="Sterky, F" sort="Sterky, F" uniqKey="Sterky F" first="F" last="Sterky">F. Sterky</name></author><author><name sortKey="Terry, A" sort="Terry, A" uniqKey="Terry A" first="A" last="Terry">A. Terry</name></author><author><name sortKey="Tsai, C J" sort="Tsai, C J" uniqKey="Tsai C" first="C-J" last="Tsai">C-J Tsai</name></author><author><name sortKey="Uberbacher, E" sort="Uberbacher, E" uniqKey="Uberbacher E" first="E" last="Uberbacher">E. Uberbacher</name></author><author><name sortKey="Unneberg, P" sort="Unneberg, P" uniqKey="Unneberg P" first="P" last="Unneberg">P. Unneberg</name></author><author><name sortKey="Vahala, J" sort="Vahala, J" uniqKey="Vahala J" first="J" last="Vahala">J. Vahala</name></author><author><name sortKey="Wall, K" sort="Wall, K" uniqKey="Wall K" first="K" last="Wall">K. Wall</name></author><author><name sortKey="Wessler, S" sort="Wessler, S" uniqKey="Wessler S" first="S" last="Wessler">S. Wessler</name></author><author><name sortKey="Yang, G" sort="Yang, G" uniqKey="Yang G" first="G" last="Yang">G. Yang</name></author><author><name sortKey="Yin, T" sort="Yin, T" uniqKey="Yin T" first="T" last="Yin">T. Yin</name></author><author><name sortKey="Douglas, C" sort="Douglas, C" uniqKey="Douglas C" first="C" last="Douglas">C. Douglas</name></author><author><name sortKey="Marra, M" sort="Marra, M" uniqKey="Marra M" first="M" last="Marra">M. Marra</name></author><author><name sortKey="Sandberg, G" sort="Sandberg, G" uniqKey="Sandberg G" first="G" last="Sandberg">G. Sandberg</name></author><author><name sortKey="Van De Peer, Y" sort="Van De Peer, Y" uniqKey="Van De Peer Y" first="Y" last="Van De Peer">Y. Van De Peer</name></author><author><name sortKey="Rokhsar, D" sort="Rokhsar, D" uniqKey="Rokhsar D" first="D" last="Rokhsar">D. Rokhsar</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2006">2006</date><idno type="RBID">pubmed:16973872</idno><idno type="pmid">16973872</idno><idno type="doi">10.1126/science.1128691</idno><idno type="wicri:Area/Main/Corpus">003D30</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">003D30</idno><idno type="wicri:Area/Main/Curation">003D30</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">003D30</idno><idno type="wicri:Area/Main/Exploration">003D30</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).</title><author><name sortKey="Tuskan, G A" sort="Tuskan, G A" uniqKey="Tuskan G" first="G A" last="Tuskan">G A Tuskan</name><affiliation wicri:level="2"><nlm:affiliation>Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA. gtk@ornl.gov</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831</wicri:regionArea><placeName><region type="state">Tennessee</region></placeName></affiliation></author><author><name sortKey="Difazio, S" sort="Difazio, S" uniqKey="Difazio S" first="S" last="Difazio">S. Difazio</name></author><author><name sortKey="Jansson, S" sort="Jansson, S" uniqKey="Jansson S" first="S" last="Jansson">S. Jansson</name></author><author><name sortKey="Bohlmann, J" sort="Bohlmann, J" uniqKey="Bohlmann J" first="J" last="Bohlmann">J. Bohlmann</name></author><author><name sortKey="Grigoriev, I" sort="Grigoriev, I" uniqKey="Grigoriev I" first="I" last="Grigoriev">I. Grigoriev</name></author><author><name sortKey="Hellsten, U" sort="Hellsten, U" uniqKey="Hellsten U" first="U" last="Hellsten">U. Hellsten</name></author><author><name sortKey="Putnam, N" sort="Putnam, N" uniqKey="Putnam N" first="N" last="Putnam">N. Putnam</name></author><author><name sortKey="Ralph, S" sort="Ralph, S" uniqKey="Ralph S" first="S" last="Ralph">S. Ralph</name></author><author><name sortKey="Rombauts, S" sort="Rombauts, S" uniqKey="Rombauts S" first="S" last="Rombauts">S. 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Yin</name></author><author><name sortKey="Douglas, C" sort="Douglas, C" uniqKey="Douglas C" first="C" last="Douglas">C. Douglas</name></author><author><name sortKey="Marra, M" sort="Marra, M" uniqKey="Marra M" first="M" last="Marra">M. Marra</name></author><author><name sortKey="Sandberg, G" sort="Sandberg, G" uniqKey="Sandberg G" first="G" last="Sandberg">G. Sandberg</name></author><author><name sortKey="Van De Peer, Y" sort="Van De Peer, Y" uniqKey="Van De Peer Y" first="Y" last="Van De Peer">Y. Van De Peer</name></author><author><name sortKey="Rokhsar, D" sort="Rokhsar, D" uniqKey="Rokhsar D" first="D" last="Rokhsar">D. Rokhsar</name></author></analytic><series><title level="j">Science (New York, N.Y.)</title><idno type="eISSN">1095-9203</idno><imprint><date when="2006" type="published">2006</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Arabidopsis (genetics)</term><term>Chromosome Mapping (MeSH)</term><term>Computational Biology (MeSH)</term><term>Evolution, Molecular (MeSH)</term><term>Expressed Sequence Tags (MeSH)</term><term>Gene Duplication (MeSH)</term><term>Gene Expression (MeSH)</term><term>Genes, Plant (MeSH)</term><term>Genome, Plant (MeSH)</term><term>Oligonucleotide Array Sequence Analysis (MeSH)</term><term>Phylogeny (MeSH)</term><term>Plant Proteins (chemistry)</term><term>Plant Proteins (genetics)</term><term>Polymorphism, Single Nucleotide (MeSH)</term><term>Populus (genetics)</term><term>Populus (growth & development)</term><term>Populus (metabolism)</term><term>Protein Structure, Tertiary (MeSH)</term><term>RNA, Plant (analysis)</term><term>RNA, Untranslated (analysis)</term><term>Sequence Analysis, DNA (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN des plantes (analyse)</term><term>ARN non traduit (analyse)</term><term>Analyse de séquence d'ADN (MeSH)</term><term>Arabidopsis (génétique)</term><term>Biologie informatique (MeSH)</term><term>Cartographie chromosomique (MeSH)</term><term>Duplication de gène (MeSH)</term><term>Expression des gènes (MeSH)</term><term>Gènes de plante (MeSH)</term><term>Génome végétal (MeSH)</term><term>Phylogenèse (MeSH)</term><term>Polymorphisme de nucléotide simple (MeSH)</term><term>Populus (croissance et développement)</term><term>Populus (génétique)</term><term>Populus (métabolisme)</term><term>Protéines végétales (composition chimique)</term><term>Protéines végétales (génétique)</term><term>Structure tertiaire des protéines (MeSH)</term><term>Séquençage par oligonucléotides en batterie (MeSH)</term><term>Étiquettes de séquences exprimées (MeSH)</term><term>Évolution moléculaire (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>RNA, Plant</term><term>RNA, Untranslated</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>ARN des plantes</term><term>ARN non traduit</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Protéines végétales</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Arabidopsis</term><term>Plant Proteins</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Arabidopsis</term><term>Populus</term><term>Protéines végétales</term></keywords><keywords scheme="MESH" qualifier="metabolism" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Chromosome Mapping</term><term>Computational Biology</term><term>Evolution, Molecular</term><term>Expressed Sequence Tags</term><term>Gene Duplication</term><term>Gene Expression</term><term>Genes, Plant</term><term>Genome, Plant</term><term>Oligonucleotide Array Sequence Analysis</term><term>Phylogeny</term><term>Polymorphism, Single Nucleotide</term><term>Protein Structure, Tertiary</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term><term>Biologie informatique</term><term>Cartographie chromosomique</term><term>Duplication de gène</term><term>Expression des gènes</term><term>Gènes de plante</term><term>Génome végétal</term><term>Phylogenèse</term><term>Polymorphisme de nucléotide simple</term><term>Structure tertiaire des protéines</term><term>Séquençage par oligonucléotides en batterie</term><term>Étiquettes de séquences exprimées</term><term>Évolution moléculaire</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">16973872</PMID><DateCompleted><Year>2006</Year><Month>09</Month><Day>25</Day></DateCompleted><DateRevised><Year>2007</Year><Month>03</Month><Day>19</Day></DateRevised><Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1095-9203</ISSN><JournalIssue CitedMedium="Internet"><Volume>313</Volume><Issue>5793</Issue><PubDate><Year>2006</Year><Month>Sep</Month><Day>15</Day></PubDate></JournalIssue><Title>Science (New York, N.Y.)</Title><ISOAbbreviation>Science</ISOAbbreviation></Journal><ArticleTitle>The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).</ArticleTitle><Pagination><MedlinePgn>1596-604</MedlinePgn></Pagination><Abstract><AbstractText>We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Tuskan</LastName><ForeName>G A</ForeName><Initials>GA</Initials><AffiliationInfo><Affiliation>Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA. gtk@ornl.gov</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Difazio</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Jansson</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Bohlmann</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Grigoriev</LastName><ForeName>I</ForeName><Initials>I</Initials></Author><Author ValidYN="Y"><LastName>Hellsten</LastName><ForeName>U</ForeName><Initials>U</Initials></Author><Author ValidYN="Y"><LastName>Putnam</LastName><ForeName>N</ForeName><Initials>N</Initials></Author><Author ValidYN="Y"><LastName>Ralph</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Rombauts</LastName><ForeName>S</ForeName><Initials>S</Initials></Author><Author ValidYN="Y"><LastName>Salamov</LastName><ForeName>A</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Schein</LastName><ForeName>J</ForeName><Initials>J</Initials></Author><Author ValidYN="Y"><LastName>Sterck</LastName><ForeName>L</ForeName><Initials>L</Initials></Author><Author ValidYN="Y"><LastName>Aerts</LastName><ForeName>A</ForeName><Initials>A</Initials></Author><Author ValidYN="Y"><LastName>Bhalerao</LastName><ForeName>R R</ForeName><Initials>RR</Initials></Author><Author ValidYN="Y"><LastName>Bhalerao</LastName><ForeName>R 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ValidYN="Y"><LastName>Marra</LastName><ForeName>M</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>Sandberg</LastName><ForeName>G</ForeName><Initials>G</Initials></Author><Author ValidYN="Y"><LastName>Van de Peer</LastName><ForeName>Y</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Rokhsar</LastName><ForeName>D</ForeName><Initials>D</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType><PublicationType UI="D013486">Research Support, U.S. Gov't, Non-P.H.S.</PublicationType></PublicationTypeList></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Science</MedlineTA><NlmUniqueID>0404511</NlmUniqueID><ISSNLinking>0036-8075</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018749">RNA, Plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D022661">RNA, Untranslated</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="CommentIn"><RefSource>Science. 2006 Sep 15;313(5793):1556</RefSource><PMID Version="1">16973849</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D017360" MajorTopicYN="N">Arabidopsis</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002874" MajorTopicYN="N">Chromosome Mapping</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019295" MajorTopicYN="N">Computational Biology</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019143" MajorTopicYN="N">Evolution, Molecular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020224" MajorTopicYN="N">Expressed Sequence Tags</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020440" MajorTopicYN="Y">Gene Duplication</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015870" MajorTopicYN="N">Gene Expression</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D017343" MajorTopicYN="N">Genes, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018745" MajorTopicYN="Y">Genome, Plant</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D020411" MajorTopicYN="N">Oligonucleotide Array Sequence Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020641" MajorTopicYN="N">Polymorphism, Single Nucleotide</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017434" MajorTopicYN="N">Protein Structure, Tertiary</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018749" MajorTopicYN="N">RNA, Plant</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D022661" MajorTopicYN="N">RNA, Untranslated</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="Y">Sequence Analysis, DNA</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2006</Year><Month>9</Month><Day>16</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2006</Year><Month>9</Month><Day>26</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2006</Year><Month>9</Month><Day>16</Day><Hour>9</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">16973872</ArticleId><ArticleId IdType="pii">313/5793/1596</ArticleId><ArticleId IdType="doi">10.1126/science.1128691</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Tennessee</li></region></list><tree><noCountry><name sortKey="Aerts, A" sort="Aerts, A" uniqKey="Aerts A" first="A" last="Aerts">A. 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Leebens-Mack</name><name sortKey="Leple, J C" sort="Leple, J C" uniqKey="Leple J" first="J-C" last="Leplé">J-C Leplé</name><name sortKey="Locascio, P" sort="Locascio, P" uniqKey="Locascio P" first="P" last="Locascio">P. Locascio</name><name sortKey="Lou, Y" sort="Lou, Y" uniqKey="Lou Y" first="Y" last="Lou">Y. Lou</name><name sortKey="Lucas, S" sort="Lucas, S" uniqKey="Lucas S" first="S" last="Lucas">S. Lucas</name><name sortKey="Marra, M" sort="Marra, M" uniqKey="Marra M" first="M" last="Marra">M. Marra</name><name sortKey="Martin, F" sort="Martin, F" uniqKey="Martin F" first="F" last="Martin">F. Martin</name><name sortKey="Montanini, B" sort="Montanini, B" uniqKey="Montanini B" first="B" last="Montanini">B. Montanini</name><name sortKey="Napoli, C" sort="Napoli, C" uniqKey="Napoli C" first="C" last="Napoli">C. Napoli</name><name sortKey="Nelson, C" sort="Nelson, C" uniqKey="Nelson C" first="C" last="Nelson">C. Nelson</name><name sortKey="Nelson, D R" sort="Nelson, D R" uniqKey="Nelson D" first="D R" last="Nelson">D R Nelson</name><name sortKey="Nieminen, K" sort="Nieminen, K" uniqKey="Nieminen K" first="K" last="Nieminen">K. Nieminen</name><name sortKey="Nilsson, O" sort="Nilsson, O" uniqKey="Nilsson O" first="O" last="Nilsson">O. Nilsson</name><name sortKey="Pereda, V" sort="Pereda, V" uniqKey="Pereda V" first="V" last="Pereda">V. Pereda</name><name sortKey="Peter, G" sort="Peter, G" uniqKey="Peter G" first="G" last="Peter">G. Peter</name><name sortKey="Philippe, R" sort="Philippe, R" uniqKey="Philippe R" first="R" last="Philippe">R. Philippe</name><name sortKey="Pilate, G" sort="Pilate, G" uniqKey="Pilate G" first="G" last="Pilate">G. Pilate</name><name sortKey="Poliakov, A" sort="Poliakov, A" uniqKey="Poliakov A" first="A" last="Poliakov">A. Poliakov</name><name sortKey="Putnam, N" sort="Putnam, N" uniqKey="Putnam N" first="N" last="Putnam">N. Putnam</name><name sortKey="Ralph, S" sort="Ralph, S" uniqKey="Ralph S" first="S" last="Ralph">S. Ralph</name><name sortKey="Razumovskaya, J" sort="Razumovskaya, J" uniqKey="Razumovskaya J" first="J" last="Razumovskaya">J. Razumovskaya</name><name sortKey="Richardson, P" sort="Richardson, P" uniqKey="Richardson P" first="P" last="Richardson">P. Richardson</name><name sortKey="Rinaldi, C" sort="Rinaldi, C" uniqKey="Rinaldi C" first="C" last="Rinaldi">C. Rinaldi</name><name sortKey="Ritland, K" sort="Ritland, K" uniqKey="Ritland K" first="K" last="Ritland">K. Ritland</name><name sortKey="Rokhsar, D" sort="Rokhsar, D" uniqKey="Rokhsar D" first="D" last="Rokhsar">D. Rokhsar</name><name sortKey="Rombauts, S" sort="Rombauts, S" uniqKey="Rombauts S" first="S" last="Rombauts">S. Rombauts</name><name sortKey="Rouze, P" sort="Rouze, P" uniqKey="Rouze P" first="P" last="Rouzé">P. Rouzé</name><name sortKey="Ryaboy, D" sort="Ryaboy, D" uniqKey="Ryaboy D" first="D" last="Ryaboy">D. Ryaboy</name><name sortKey="Salamov, A" sort="Salamov, A" uniqKey="Salamov A" first="A" last="Salamov">A. Salamov</name><name sortKey="Sandberg, G" sort="Sandberg, G" uniqKey="Sandberg G" first="G" last="Sandberg">G. Sandberg</name><name sortKey="Schein, J" sort="Schein, J" uniqKey="Schein J" first="J" last="Schein">J. Schein</name><name sortKey="Schmutz, J" sort="Schmutz, J" uniqKey="Schmutz J" first="J" last="Schmutz">J. Schmutz</name><name sortKey="Schrader, J" sort="Schrader, J" uniqKey="Schrader J" first="J" last="Schrader">J. Schrader</name><name sortKey="Segerman, B" sort="Segerman, B" uniqKey="Segerman B" first="B" last="Segerman">B. Segerman</name><name sortKey="Shin, H" sort="Shin, H" uniqKey="Shin H" first="H" last="Shin">H. Shin</name><name sortKey="Siddiqui, A" sort="Siddiqui, A" uniqKey="Siddiqui A" first="A" last="Siddiqui">A. Siddiqui</name><name sortKey="Sterck, L" sort="Sterck, L" uniqKey="Sterck L" first="L" last="Sterck">L. Sterck</name><name sortKey="Sterky, F" sort="Sterky, F" uniqKey="Sterky F" first="F" last="Sterky">F. Sterky</name><name sortKey="Terry, A" sort="Terry, A" uniqKey="Terry A" first="A" last="Terry">A. Terry</name><name sortKey="Tsai, C J" sort="Tsai, C J" uniqKey="Tsai C" first="C-J" last="Tsai">C-J Tsai</name><name sortKey="Uberbacher, E" sort="Uberbacher, E" uniqKey="Uberbacher E" first="E" last="Uberbacher">E. Uberbacher</name><name sortKey="Unneberg, P" sort="Unneberg, P" uniqKey="Unneberg P" first="P" last="Unneberg">P. Unneberg</name><name sortKey="Vahala, J" sort="Vahala, J" uniqKey="Vahala J" first="J" last="Vahala">J. Vahala</name><name sortKey="Van De Peer, Y" sort="Van De Peer, Y" uniqKey="Van De Peer Y" first="Y" last="Van De Peer">Y. Van De Peer</name><name sortKey="Wall, K" sort="Wall, K" uniqKey="Wall K" first="K" last="Wall">K. Wall</name><name sortKey="Wessler, S" sort="Wessler, S" uniqKey="Wessler S" first="S" last="Wessler">S. Wessler</name><name sortKey="Yang, G" sort="Yang, G" uniqKey="Yang G" first="G" last="Yang">G. Yang</name><name sortKey="Yin, T" sort="Yin, T" uniqKey="Yin T" first="T" last="Yin">T. Yin</name></noCountry><country name="États-Unis"><region name="Tennessee"><name sortKey="Tuskan, G A" sort="Tuskan, G A" uniqKey="Tuskan G" first="G A" last="Tuskan">G A Tuskan</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|wiki= Bois
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|texte= The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
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